feat(python): durable transaction subsystem and Kiro IDE 1.0 adapter

Land the crash-recoverable managed-file transaction engine (journal,
staging, commit, restart recovery, opaque snapshots, private artifacts,
Windows DACL hardening) and the Kiro IDE 1.0 workspace hook plugin with
legacy migration.

Repair five defects that kept the suite red (426 failures to zero):

- Anchor the transaction state directory at ~/.elydora/transactions
  instead of the shared system temp directory. The recovery journal now
  shares fate with the runtimes it repairs, survives temp cleaners, and
  isolates naturally under per-test fake homes.
- Skip pending-transaction recovery when no state directory exists so
  rejected installs never create runtime directories.
- Create the runtime root's parent before hardening it, matching the Go
  SDK's expand behavior for fresh homes.
- Stop using file timestamps as identity evidence: Windows exposes
  mtime/ctime with delayed cross-handle visibility. Reads now prove
  stability through a verification re-read; snapshots compare device,
  inode, size, and SHA-256.
- Stop comparing synthetic Windows permission bits across stat
  boundaries: path stats derive execute bits from file extensions while
  handle stats do not, which falsely flagged every managed .cmd wrapper.
  Snapshots store raw modes for restoration and compare portable bits.

Reservation cleanup now verifies content before discarding so a
concurrent writer's file at a rollback path is preserved, and the
install-failure tests assert the precise contract: no agent runtime
residue, with the durable state directory allowed to remain.

Gates: pytest 807 passed, mypy clean, pip check clean, wheel builds.
This commit is contained in:
ZacharyZhang-NY committed 2026-07-21 18:53:06 -04:00
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"""Streaming, identity-bound removal for arbitrarily large runtime files."""
from __future__ import annotations
from dataclasses import dataclass
import os
from typing import Optional
from uuid import uuid4
from ._durable_file import copy_into_reserved
from ._managed_files import FileSnapshot, identity_mode_bits
from ._opaque_snapshot import (
OpaqueFileSnapshot,
_require_regular,
stream_opaque_snapshot,
)
from ._pinned_directory import PinnedDirectory
from ._private_artifact import QuarantinedFile, reserve_private_path
@dataclass(frozen=True)
class OpaqueRemovalChange:
file_path: str
label: str
original: Optional[OpaqueFileSnapshot]
@dataclass
class StagedOpaqueRemoval:
change: OpaqueRemovalChange
directory: PinnedDirectory
rollback_path: Optional[str]
rollback_reservation: Optional[FileSnapshot] = None
rollback_snapshot: Optional[OpaqueFileSnapshot] = None
committed: bool = False
def prepare_opaque_removal(
directory: PinnedDirectory,
file_path: str,
label: str,
) -> OpaqueRemovalChange:
return OpaqueRemovalChange(
file_path,
label,
stream_opaque_snapshot(directory, file_path, label),
)
def _same_captured(
current: Optional[OpaqueFileSnapshot],
expected: Optional[OpaqueFileSnapshot],
*,
include_mode: bool = True,
) -> bool:
if current is None or expected is None:
return current is expected
return (
current.device == expected.device
and current.inode == expected.inode
and (
identity_mode_bits(current.mode) == identity_mode_bits(expected.mode)
or not include_mode
)
and current.size == expected.size
and current.sha256 == expected.sha256
)
def assert_opaque_unchanged(
change: OpaqueRemovalChange,
directory: PinnedDirectory,
operation: str,
) -> None:
current = stream_opaque_snapshot(
directory,
change.file_path,
change.label,
)
if current != change.original:
raise OSError(
f"{change.label} changed during {operation}: {change.file_path}"
)
def stage_opaque_removal(
change: OpaqueRemovalChange,
directory: PinnedDirectory,
operation: str,
) -> StagedOpaqueRemoval:
assert_opaque_unchanged(change, directory, operation)
if change.original is None:
return StagedOpaqueRemoval(change, directory, None)
basename = os.path.basename(change.file_path)
rollback_name = f".{basename}.{uuid4().hex}.opaque-rollback"
rollback_path = directory.path_for(rollback_name)
reservation = reserve_private_path(
directory,
rollback_path,
f"{change.label} rollback",
)
return StagedOpaqueRemoval(change, directory, rollback_path, reservation)
def _rollback_snapshot(staged: StagedOpaqueRemoval) -> Optional[OpaqueFileSnapshot]:
if staged.rollback_path is None:
return None
return stream_opaque_snapshot(
staged.directory,
staged.rollback_path,
f"{staged.change.label} rollback",
require_owner_only=False,
)
def _target_snapshot(staged: StagedOpaqueRemoval) -> Optional[OpaqueFileSnapshot]:
return stream_opaque_snapshot(
staged.directory,
staged.change.file_path,
staged.change.label,
require_owner_only=False,
)
def _capture_physical(staged: StagedOpaqueRemoval) -> None:
del staged
def prepare_opaque_rollback(staged: StagedOpaqueRemoval) -> None:
"""Copy and flush opaque rollback data while its public target stays present."""
original = staged.change.original
if original is None:
return
rollback_path = staged.rollback_path
reservation = staged.rollback_reservation
if rollback_path is None or reservation is None:
raise OSError(f"Missing rollback reservation for {staged.change.label}")
_capture_physical(staged)
try:
assert_opaque_unchanged(staged.change, staged.directory, "commit boundary")
except OSError as error:
raise OSError(
f"{staged.change.label} changed at commit boundary: "
f"{staged.change.file_path}"
) from error
try:
current_reservation = staged.directory.read_file(
staged.directory.name_for(rollback_path),
f"{staged.change.label} rollback reservation",
0,
)
except ValueError as error:
raise OSError(
f"{staged.change.label} existing rollback reservation changed: "
f"{rollback_path}"
) from error
if current_reservation != reservation:
raise OSError(
f"{staged.change.label} existing rollback reservation changed: "
f"{rollback_path}"
)
copy_into_reserved(
staged.directory,
staged.change.file_path,
rollback_path,
(original.device, original.inode),
(reservation.device, reservation.inode),
0o600,
staged.change.label,
)
assert_opaque_unchanged(staged.change, staged.directory, "rollback preparation")
prepared = _rollback_snapshot(staged)
if (
prepared is None
or prepared.device != reservation.device
or prepared.inode != reservation.inode
or prepared.size != original.size
or prepared.sha256 != original.sha256
or (os.name != "nt" and prepared.mode != 0o600)
):
raise OSError(
f"{staged.change.label} rollback changed while preparing: {rollback_path}"
)
staged.rollback_snapshot = prepared
staged.rollback_reservation = None
def _secure_rollback(staged: StagedOpaqueRemoval) -> OpaqueFileSnapshot:
captured = staged.rollback_snapshot
if staged.rollback_path is None or captured is None:
raise OSError(f"Missing rollback data for {staged.change.label}")
name = staged.directory.name_for(staged.rollback_path)
flags = (os.O_RDWR if os.name == "nt" else os.O_RDONLY) | getattr(
os, "O_BINARY", 0
)
flags |= getattr(os, "O_CLOEXEC", 0) | getattr(os, "O_NOFOLLOW", 0)
descriptor = -1
try:
descriptor = staged.directory.open_file(name, flags)
metadata = os.fstat(descriptor)
_require_regular(metadata, staged.rollback_path, staged.change.label, False)
if (metadata.st_dev, metadata.st_ino) != (
captured.device,
captured.inode,
):
raise OSError(
f"{staged.change.label} rollback changed before securing: "
f"{staged.rollback_path}"
)
staged.directory.chmod_descriptor(descriptor, 0o600)
os.fsync(descriptor)
finally:
if descriptor >= 0:
os.close(descriptor)
secured = _rollback_snapshot(staged)
if not _same_captured(secured, captured, include_mode=False):
raise OSError(
f"{staged.change.label} rollback changed while securing: "
f"{staged.rollback_path}"
)
if os.name != "nt" and secured is not None and secured.mode != 0o600:
raise OSError(
f"{staged.change.label} rollback has an unexpected mode: "
f"{staged.rollback_path}"
)
if secured is None:
raise OSError(f"Missing rollback data for {staged.change.label}")
staged.rollback_snapshot = secured
return secured
def _preserve_rollback(staged: StagedOpaqueRemoval, error: Exception) -> OSError:
if staged.rollback_path is None:
return error if isinstance(error, OSError) else OSError(str(error))
rollback_path = staged.rollback_path
staged.rollback_path = None
return OSError(f"{error}; original content preserved at {rollback_path}")
def _restore_snapshot(
staged: StagedOpaqueRemoval,
captured: OpaqueFileSnapshot,
restore_mode: int,
) -> None:
if staged.rollback_path is None:
raise OSError(f"Missing rollback path for {staged.change.label}")
if _target_snapshot(staged) is not None:
raise _preserve_rollback(
staged,
OSError(
f"{staged.change.label} changed before restoration: "
f"{staged.change.file_path}"
),
)
target_name = staged.directory.name_for(staged.change.file_path)
rollback_path = staged.rollback_path
rollback_file = QuarantinedFile.capture(
staged.directory,
rollback_path,
f"{staged.change.label} rollback",
)
current = stream_opaque_snapshot(
rollback_file.container,
rollback_file.entry_path,
f"{staged.change.label} rollback",
require_owner_only=False,
)
if not _same_captured(current, captured):
try:
rollback_file.restore(rollback_path)
except Exception as error:
preserved = (
rollback_file.preserve()
if rollback_file.active
else rollback_path
)
staged.rollback_path = None
raise OSError(
f"{staged.change.label} rollback changed before restoration: "
f"{rollback_path}; concurrent data preserved at {preserved}: {error}"
) from error
staged.rollback_path = None
raise OSError(
f"{staged.change.label} rollback changed before restoration: "
f"{rollback_path}"
)
try:
rollback_file.restore(staged.change.file_path)
except Exception as error:
preserved = (
rollback_file.preserve()
if rollback_file.active
else rollback_path
)
staged.rollback_path = None
raise OSError(
f"{error}; original content preserved at {preserved}"
) from error
staged.rollback_path = None
restored = _target_snapshot(staged)
if not _same_captured(restored, captured):
raise _preserve_rollback(
staged,
OSError(
f"{staged.change.label} changed while restoring: "
f"{staged.change.file_path}"
),
)
if restored is None:
raise OSError(f"Missing restored data for {staged.change.label}")
staged.directory.chmod_file(
target_name,
restore_mode,
(restored.device, restored.inode),
)
restored = _target_snapshot(staged)
if (
not _same_captured(restored, captured, include_mode=False)
or restored is None
or restored.mode != restore_mode
):
raise _preserve_rollback(
staged,
OSError(
f"{staged.change.label} metadata restoration failed: "
f"{staged.change.file_path}"
),
)
staged.rollback_snapshot = None
staged.committed = False
def commit_opaque_removal(staged: StagedOpaqueRemoval) -> None:
original = staged.change.original
if original is None:
assert_opaque_unchanged(staged.change, staged.directory, "transaction")
return
assert_opaque_unchanged(staged.change, staged.directory, "transaction")
if staged.rollback_path is None or staged.rollback_snapshot is None:
raise OSError(f"Missing rollback data for {staged.change.label}")
captured_file = QuarantinedFile.capture(
staged.directory,
staged.change.file_path,
staged.change.label,
)
captured = stream_opaque_snapshot(
captured_file.container,
captured_file.entry_path,
staged.change.label,
require_owner_only=False,
)
if captured is None:
preserved = captured_file.preserve()
raise OSError(
f"Missing captured original for {staged.change.label}; "
f"transaction data preserved at {preserved}"
)
if not _same_captured(captured, original):
boundary_error = OSError(
f"{staged.change.label} changed at commit boundary: "
f"{staged.change.file_path}"
)
try:
captured_file.restore(staged.change.file_path)
except Exception as restore_error:
preserved = (
captured_file.preserve()
if captured_file.active
else staged.change.file_path
)
raise OSError(
f"{boundary_error}; concurrent data preserved at {preserved}: "
f"{restore_error}"
) from boundary_error
raise boundary_error
captured_file.discard()
staged.directory.sync()
staged.committed = True
if _target_snapshot(staged) is not None:
raise OSError(
f"{staged.change.label} reappeared after capture: "
f"{staged.change.file_path}"
)
def assert_staged_opaque(staged: StagedOpaqueRemoval, operation: str) -> None:
if staged.change.original is None:
assert_opaque_unchanged(staged.change, staged.directory, operation)
return
if not staged.committed:
assert_opaque_unchanged(staged.change, staged.directory, operation)
return
if _target_snapshot(staged) is not None:
raise OSError(
f"{staged.change.label} changed during {operation}: "
f"{staged.change.file_path}"
)
current = _rollback_snapshot(staged)
if current != staged.rollback_snapshot:
raise OSError(
f"{staged.change.label} rollback changed during {operation}: "
f"{staged.rollback_path}"
)
def rollback_opaque_removal(staged: StagedOpaqueRemoval) -> None:
if not staged.committed:
return
original = staged.change.original
if original is None or staged.rollback_snapshot is None:
raise OSError(f"Missing rollback data for {staged.change.label}")
_restore_snapshot(staged, staged.rollback_snapshot, original.mode)
restored = _target_snapshot(staged)
if (
not _same_captured(restored, original, include_mode=False)
or restored is None
or restored.mode != original.mode
):
raise OSError(
f"{staged.change.label} changed after restoration: "
f"{staged.change.file_path}"
)
__all__ = [
"OpaqueRemovalChange",
"StagedOpaqueRemoval",
"assert_opaque_unchanged",
"assert_staged_opaque",
"commit_opaque_removal",
"prepare_opaque_removal",
"prepare_opaque_rollback",
"rollback_opaque_removal",
"stage_opaque_removal",
"stream_opaque_snapshot",
]