feat(04-01): refactor all notify() call sites to use structured NotificationOptions

- Change ipc-support.ts notify() from (title, body) to (options: NotificationOptions)
- Wire createNotificationService in bootstrap-application.ts with lazy service graph refs
- Update all 12 call sites with entity context, urgency, navigation, and batch keys
- Update dependency interfaces in service-graph, worker, orchestration, automation, updater, desktop-shell
- No string-based notify() calls remain in src/main/

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

src/main/service-graph.ts

@@ -12,6 +12,7 @@ import { createWorkerService } from "./worker-service";
 import { createAppLifecycleService } from "./app-lifecycle-service";
 import type { DesktopEvent, RunRecord } from "@shared/types";
 import type { AutomationEventContext } from "./automation-service";
+import type { NotificationOptions } from "./notification-service";
 
 interface ServiceGraphDependencies {
   db: AppDatabase;
@@ -32,7 +33,7 @@ interface ServiceGraphDependencies {
   };
   emitEvent: (event: DesktopEvent) => void;
   publishDomainChanged: () => void;
-  notify: (title: string, body: string) => void;
+  notify: (options: NotificationOptions) => void;
   createRunToken: (agentId: string, companyId: string, runId: string) => string;
   seedDefaultAutomationRules: (companyId: string) => void;
 }