The product path pulled every atom into Python and rebuilt a BM25Okapi
index per query: p50 20.16s over 165,973 atoms. It now runs one SQLite
statement with LIMIT/OFFSET.
- text_index.py: one normalizer for both sides of the index. CJK runs are
split per character (unicode61 cannot segment them), camelCase and
separators are split so "search atoms" finds SearchAtoms, latin tokens
get a prefix match. Rows written before this existed hold raw text in
atom_fts, so schema v3 rebuilds the index on upgrade.
- retrieval.py: filters (holder / scenario / source / modality / since /
until / min_trust), a base64 cursor, and reciprocal rank fusion in place
of the 0.55/0.35/0.10 blend whose graph term was always zero.
- An empty result is {status: "no_match"}, not a bare array.
- Go: search_atoms and compile_context rank through POST /api/search. The
second Go tokenizer is deleted; two implementations could drift, which
is what the MCP/HTTP parity requirement forbids.
- db.py passed 500 lines, so the row codec moved to row_codec.py.
- Tooling: installed the repo's own pyright. pyrightconfig.json had no
exclude and swept the downloaded corpus (1171 errors); with excludes the
count is 62, all pre-existing (evals 48, profiles 4, training 4,
ingestion 3, runtime 2, cartridge_assets 1). backend/pyproject.toml
carried a second [tool.pyright] that shadowed the root config; deleted.
- bench/scale_check.py measures the product search at corpus size. The
100k-atom p50 number is not written until it is measured on an idle
machine.
Verification: 112 pytest passed; go build/vet/test clean, gofmt clean;
ruff clean on every touched file; mypy clean on the 14 touched Python
files; repo pyright 62 errors, unchanged per-file ledger.
Three defects made the external baseline numbers and labels wrong.
- bench/systems.py: _sentence_model rebuilt the model on every query, so dense arm
latency was mostly model loading and the latency-vs-size curve was flat because a
constant dominated it. Models are now cached per process.
- bench/counterpart.py: visible() and search() walked 404k Python objects per query.
Per-item holder/source/time columns are built once and the query path is numpy;
12.5 queries/s instead of 0.7.
- bench/metrics.py: the aggregate key was named wrong_holder_confidence_unanswerable
while it counts top hits that ARE from the asking holder. BASELINE.md read that
backwards. Renamed to top_hit_from_holder_unanswerable and the sentence rewritten.
- bench/run_external.py: the by-modality table read row['answerable'] but aggregate
emits n_answerable, so the writer died after scoring finished. Each store is now
scored twice, [holder scope] and [whole corpus], so the gain from the holder
boundary is separable from the gain from ranking; progress lines every 500 queries.
Verification: pytest bench/tests -q -> 61 passed; ruff check bench/ -> all checks
passed; mypy (fresh cache) -> no issues in 25 source files.
Latency measured while another job hogs the cores is not comparable: the scale curve
moved from 1.315s to 0.809s at 50,000 sources between two runs of the same code.
- bench/systems.py: machine_facts() reports cpus plus the 1/5/15 minute load average.
- bench/run.py, bench/run_external.py: both reports carry it, and BASELINE.md labels
the latency table a ceiling when the machine was busy.
Verification: pytest bench/tests -q -> 60 passed; ruff check bench/ -> all checks
passed; mypy (fresh cache) -> no issues in 25 source files.
The frozen baseline showed the unmodified RetrievalService agreeing with an equivalent
BM25 index on 0% of its top ten results. Reproduced by hand: its top ten atoms came
from one document's pages, so a source-level ranking cannot overlap it.
- bench/systems.py: live_product_rankings also counts distinct sources behind the
product's top-k atoms.
- bench/run.py: scale probes no longer filtered by gold (a source prefix keeps almost
no gold, so the 500/2,000/10,000 rows were silently skipped); scale_arm_names reads
only latency dicts, which is what crashed write_markdown on the note field; the
unanswerable share is computed instead of hard-coded.
- bench/tests/test_joint.py: 60 tests total, including the writer regression.
Verification: pytest bench/tests -q -> 60 passed; ruff check bench/ -> all checks
passed; mypy (fresh cache) -> no issues in 25 source files.
The per-arm runner recomputed BM25 and the dense matmul for every arm, which put the
full ablation at roughly 16 hours and left no way to survive a kill. JointRunner
computes each signal once per query, attributes latency to the components each arm
uses, and checkpoints every query to runs/baseline/rankings.jsonl.
- bench/systems.py: JointRunner + ARM_COMPONENTS signal attribution.
- bench/run.py: joint pass, rankings cache with a run fingerprint, per-query resume,
latency summary, resident-memory progress lines.
- bench/tests/test_joint.py: joint rankings equal the per-arm rankings for all five
arms; the sparse corpus is scored once even with three arms that need it; cache
fingerprint mismatch and malformed rows fail fast.
- bench/reports/EXTERNAL_APPENDIX.md: what a real Mem0/Zep run would cost, and which
published numbers are comparable at all.
Verification: pytest bench/tests -q -> 57 passed; ruff check bench/ -> all checks
passed; mypy (fresh cache) -> no issues in 25 source files.
The merged database names a source by content hash (`11089_4f2a...`) while the
frozen sets name the same file by its corpus id, so every arm scored 0.000 until
load_atoms joined atoms through sources.path. It now returns corpus ids and
refuses an atom it cannot trace to a corpus file.
Also fixes found by running the harness:
- merge rebuilt atom_fts from the deduped atoms table; two attempts on one file
left 288,266 fts rows for 165,973 atoms.
- merge accepts the two honest reasons a corpus file has no product source
(500 byte-identical LongMemEval sessions collapse under content hashing, and
12 photos that ONNX Runtime cannot decode) and reports them.
- --arms used action=extend against a non-empty default, so naming two arms ran
seven.
- the dense cache is keyed by the atom set, so a scale-curve subset cannot be
scored with full-corpus vectors.
- write_markdown crashed on a run that covered only some modalities.
- bench/ingest_baseline.py drives the unmodified product IngestionService over
all 50,789 corpus files in sharded SQLite DBs, then merges them. Thread and
memory ceilings are set explicitly: ONNX Runtime defaulted to every core
(95 threads/worker, load 490) and its CPU arena kept freed pages mapped,
which OOM-killed workers.
- bench/metrics.py: recall@k, MRR, nDCG@10, Wilson lower bound, chance
baseline. No model, no product import, so the scorer cannot grade itself.
- bench/systems.py + bench/run.py: the five ablation arms over the merged DB,
latency percentiles, scale curve, and a top-10 equivalence check against the
live RetrievalService.
- bench/counterpart.py + bench/run_external.py: in-repo Mem0-style flat store
and Zep-style temporal store as the external reference point.
- bench/audit.py: enforces single-attempt scoring, frozen n, a chance row
beside every score, and producer != verifier. It already flags the product's
retry-until-target loop at backend/src/ely_eye/evals.py:2351.
- backend/pyproject.toml: rapidocr-onnxruntime>=1.4.4 was unsatisfiable
(PyPI maxes at 1.2.3); the successor is the renamed rapidocr package.
ZacharyZhang-NY