Files
ely-eye/bench/tests/test_joint.py
T
ZacharyZhang-NY 674c88e84e Rank memory search in SQL instead of rebuilding BM25 in Python
The product path pulled every atom into Python and rebuilt a BM25Okapi
index per query: p50 20.16s over 165,973 atoms. It now runs one SQLite
statement with LIMIT/OFFSET.

- text_index.py: one normalizer for both sides of the index. CJK runs are
  split per character (unicode61 cannot segment them), camelCase and
  separators are split so "search atoms" finds SearchAtoms, latin tokens
  get a prefix match. Rows written before this existed hold raw text in
  atom_fts, so schema v3 rebuilds the index on upgrade.
- retrieval.py: filters (holder / scenario / source / modality / since /
  until / min_trust), a base64 cursor, and reciprocal rank fusion in place
  of the 0.55/0.35/0.10 blend whose graph term was always zero.
- An empty result is {status: "no_match"}, not a bare array.
- Go: search_atoms and compile_context rank through POST /api/search. The
  second Go tokenizer is deleted; two implementations could drift, which
  is what the MCP/HTTP parity requirement forbids.
- db.py passed 500 lines, so the row codec moved to row_codec.py.
- Tooling: installed the repo's own pyright. pyrightconfig.json had no
  exclude and swept the downloaded corpus (1171 errors); with excludes the
  count is 62, all pre-existing (evals 48, profiles 4, training 4,
  ingestion 3, runtime 2, cartridge_assets 1). backend/pyproject.toml
  carried a second [tool.pyright] that shadowed the root config; deleted.
- bench/scale_check.py measures the product search at corpus size. The
  100k-atom p50 number is not written until it is measured on an idle
  machine.

Verification: 112 pytest passed; go build/vet/test clean, gofmt clean;
ruff clean on every touched file; mypy clean on the 14 touched Python
files; repo pyright 62 errors, unchanged per-file ledger.
2026-10-07 16:02:40 -04:00

220 lines
7.4 KiB
Python

"""JointRunner must rank exactly like ArmRunner, and the rankings cache must resume.
The ablation switched to a single pass that computes each signal once. If that pass
drifted from the per-arm path, the baseline would silently measure a different system.
"""
from __future__ import annotations
import json
from pathlib import Path
from typing import Any
import pytest
from bench import systems
from bench.run import (
Query,
fingerprint,
latency,
load_rankings,
remeasure_latency,
scale_arm_names,
scale_probes,
write_markdown,
)
from bench.systems import ARMS, ArmRunner, Atom, JointRunner
from bench.tests.test_systems import ATOMS
MODEL_ARMS = ["bm25_only", "graph_only", "dense_only", "no_rerank", "fusion_rerank"]
def _queries() -> list[str]:
return ["alpha report", "beta invoice", "gamma", ""]
@pytest.mark.parametrize("arm", MODEL_ARMS)
def test_joint_ranking_matches_the_per_arm_runner(arm: str, tmp_path: Path, monkeypatch: pytest.MonkeyPatch) -> None:
monkeypatch.setattr(systems, "INDEX_DIR", tmp_path)
queries = _queries()
joint = JointRunner([arm], ATOMS, systems.MODELS)
per_arm = ArmRunner(arm, ATOMS, systems.MODELS)
for query in queries:
expected = per_arm.rank(query)
ranked, seconds = joint.rank_all(query)[arm]
assert ranked == expected, f"{arm} drifted from the per-arm path on {query!r}"
assert seconds >= 0.0
def test_joint_runner_computes_the_sparse_signal_once_per_query(
tmp_path: Path, monkeypatch: pytest.MonkeyPatch
) -> None:
monkeypatch.setattr(systems, "INDEX_DIR", tmp_path)
joint = JointRunner(["bm25_only", "no_rerank", "fusion_rerank"], ATOMS, systems.MODELS)
calls = 0
assert joint._sparse is not None
original = joint._sparse.scores
def counting_scores(query: str):
nonlocal calls
calls += 1
return original(query)
monkeypatch.setattr(joint._sparse, "scores", counting_scores)
joint.rank_all("alpha report")
assert calls == 1, "three arms that all need BM25 must still score the corpus once"
def test_joint_runner_rejects_unknown_or_empty_arm_lists() -> None:
with pytest.raises(SystemExit, match="unknown arm"):
JointRunner(["vibes"], ATOMS, systems.MODELS)
with pytest.raises(SystemExit, match="at least one arm"):
JointRunner([], ATOMS, systems.MODELS)
def test_rankings_cache_resumes_and_refuses_a_mismatched_run(tmp_path: Path) -> None:
atoms = [Atom(atom_id=f"a{index}", source_id=f"s{index}", text=f"text {index}") for index in range(3)]
queries = [
Query(
query_id=f"q{index}",
text="t",
modality="pdf",
gold=frozenset({"s0"}),
holder="h",
answerable=True,
as_of=None,
)
for index in range(2)
]
mark = fingerprint(["bm25_only"], queries, atoms)
path = tmp_path / "rankings.jsonl"
assert load_rankings(path, mark) == {}
rows = [json.dumps({"fingerprint": mark}), json.dumps({"query_id": "q0", "arms": {"bm25_only": {"ranked": ["s0"]}}})]
path.write_text("\n".join(rows) + "\n", encoding="utf-8")
assert load_rankings(path, mark) == {"q0": {"bm25_only": {"ranked": ["s0"]}}}
with pytest.raises(SystemExit, match="different run"):
load_rankings(path, "other")
path.write_text("\n".join([rows[0], "{not json"]) + "\n", encoding="utf-8")
with pytest.raises(SystemExit, match="not JSON"):
load_rankings(path, mark)
def test_latency_needs_samples() -> None:
assert latency([0.5, 1.0])["p50"] == pytest.approx(0.75)
with pytest.raises(SystemExit, match="no latency samples"):
latency([])
def test_every_arm_declares_the_signals_it_consumes() -> None:
assert set(systems.ARM_COMPONENTS) == set(ARMS)
def _probe_set(count: int) -> list[Query]:
return [
Query(
query_id=f"q{index}",
text="t",
modality="pdf",
gold=frozenset({f"s{index}"}),
holder="h",
answerable=index % 2 == 0,
as_of=None,
)
for index in range(count)
]
def test_scale_probes_ignore_gold_so_every_corpus_size_is_measured() -> None:
queries = _probe_set(100)
probes = scale_probes(queries, 10)
assert len(probes) == 10
assert all(query.answerable for query in probes)
assert probes == scale_probes(queries, 10), "the curve must be reproducible across runs"
assert {query.query_id for query in probes} <= {q.query_id for q in queries if q.answerable}
with pytest.raises(SystemExit, match="at least one probe"):
scale_probes(queries, 0)
with pytest.raises(SystemExit, match="needs answerable"):
scale_probes([], 10)
def _overall() -> dict[str, float]:
return {
"recall_at_1": 0.3,
"recall_at_5": 0.4,
"recall_at_10": 0.5,
"ndcg_at_10": 0.42,
"mrr": 0.4,
"hit_at_10": 0.52,
"hit_at_10_wilson_lower": 0.45,
"abstention_rate_answerable": 0.0,
"abstention_rate_unanswerable": 0.0,
"top_hit_from_holder_unanswerable": 0.2,
}
def _report() -> dict:
return {
"meta": {
"generated_at": "2026-01-01T00:00:00+00:00",
"git_commit": "a" * 40,
"corpus_sources": 10,
"queries": 16,
"answerable": 8,
"machine": {
"system": "Linux",
"release": "x",
"cpus": 32,
"threads_per_query": 4,
"load_average_1_5_15": [1.0, 2.0, 3.0],
},
"models": {"dense": "d", "rerank": "r"},
},
"chance": {"recall_at_1": 0.0, "recall_at_5": 0.0, "recall_at_10": 0.0},
"arms": [
{
"arm": "bm25_only",
"overall": _overall(),
"by_modality": {"pdf": _overall()},
"latency_seconds": {"p50": 0.1, "p95": 0.2},
}
],
"live_product": {
"queries": 2,
"top_k": 10,
"p50": 1.0,
"mean": 1.0,
"max": 1.0,
"top10_overlap_with_bm25_only": 0.0,
"identical_top10": 0.0,
"distinct_sources_in_top10": {"mean": 7.5, "min": 1, "max": 10},
},
"scale": [
{"sources": 500, "atoms": 900, "queries": 4, "note": "latency only", "bm25_only": {"p50": 0.001, "p95": 0.002}}
],
}
def test_the_report_writer_survives_a_scale_note(tmp_path: Path) -> None:
path = tmp_path / "BASELINE.md"
write_markdown(_report(), path)
text = path.read_text(encoding="utf-8")
assert "| 500 | 900 | 0.001/0.002 |" in text
assert "_latency only_" in text
assert "load average 1.0 on 32 cores" in text
assert "## unanswerable queries (50.0% of the suite)" in text
def test_scale_arm_names_reads_only_latency_dicts() -> None:
assert scale_arm_names(_report()["scale"]) == ["bm25_only"]
with pytest.raises(SystemExit, match="no measured arm"):
scale_arm_names([{"sources": 500, "note": "latency only"}])
def test_remeasure_latency_replaces_cached_seconds_with_a_warm_sample() -> None:
arms: list[dict[str, Any]] = [{"arm": "bm25_only", "latency_seconds": {"p50": 99.0}}]
remeasure_latency(arms, JointRunner(["bm25_only"], ATOMS, systems.MODELS), _probe_set(8), 4)
measured = arms[0]["latency_seconds"]
assert measured["p50"] < 99.0
assert measured["queries"] == 4
assert "warm models" in measured["note"]