Full-codebase ts-prune + manual audit sweep. Every change below is a pure
deletion (or a 2-line re-wire where a dead function was supposed to be
alive). No scope additions.
Dead wrappers / phantom features
- shouldAutoApproveApproval: zero-value wrapper over shouldAutoApprove.
Four call sites now import shouldAutoApprove from execution-policy
directly.
- evaluateRotation(session, connectorId, thresholdsOverride): the
connectorId arg was never read (underscored), and thresholdsOverride
was only exercised by the test suite — no production caller. Signature
collapses to evaluateRotation(session). DEFAULT_THRESHOLDS /
RotationThresholds exports and their tests go with it.
- installLogRedactor: defensive console wrapper that was never wired
from worker-entry. buildRedactor handles the known threat (env-value
leaks); the pattern-based redactTokens stays for tests and future
composition.
Dead files
- resume-interrupted-tasks.ts: helper function never imported.
- service-graph-orchestration-deps.ts: three factory closures
superseded by the inline closures in create-orchestration-service.
Dead exports
- listConnectorsByAuthKind (shared/connector-catalog)
- getLocalePromptInstruction + whole localization.ts file
- ImportantDocType
- main-side ConnectorAuthKind (duplicated the shared one; not referenced)
- CheckpointEngineService, RunHousekeepingService types
- WorkspaceResolution type
- cmdOrCtrlSymbol
- AgentEventPush, CredentialPayload type aliases
- parseApprovalPayloadJson, parseEnvValue, ProviderCard
- getSOP — buildSOPSection reads the SOPS map directly; the individual
getter had no callers. Deduped to a flat array.
- renderWakeReason in wake-reasons/en.ts: byte-for-byte duplicate of the
one in wake-reasons/index.ts.
Forgotten wiring (not cleanup, but adjacent)
- registerAgentStandupRoute: the GET /api/agents/me/standup endpoint is
advertised in every system prompt and wake-reason doc, but the route
handler was never registered in api-server/index.ts. Agents have been
hitting 404 since Pi Mono. Registered.
Dead DB column
- v44 migration drops runs.context_snapshot_json. Column was added by
v16-v25, never written or read, and v43's deliberate preservation
was an interim measure. Same idempotent table-rebuild pattern as
v41/v43.
Test tree
- Phantom-feature threshold override tests removed (3). The rest of
the rotation suite re-expressed against the real maxRuns=20 floor.
495/495 unit tests pass. typecheck + build clean.
The NOT NULL constraint forced heartbeat runs to synthesize a fake task
row (`[Heartbeat] X — Check for work`) so the FK could resolve. Three
layers of code — acquireHeartbeatTask, findReusableHeartbeatTask,
cleanupDuplicateHeartbeatTasks, plus the is_heartbeat flag column + UI
filter — existed to paper over one bad constraint. Remove the
constraint and the whole workaround vanishes.
SQLite table rebuild with data preservation. Live production DB, no
backup — migration is atomic, idempotent, and verified before DROP.
## Migration v35 (rebuild runs with nullable task_id)
Uses `fn:` form so it can:
- Snapshot `COUNT(*) FROM runs` before copy
- Walk `PRAGMA table_info(runs)` to detect drift columns (v34 declared
a column set; any additive ALTER since v14 shows up here)
- Assert `COUNT(*) FROM runs_new == beforeCount` before `DROP TABLE runs`
- `PRAGMA defer_foreign_keys = ON` so run_events(run_id) FK defers to
commit time, by which runs has the same id set under the new name
- Recreate all 6 indexes on the new table
If the assertion fails, the migration throws inside the existing
`transaction()` wrapper. SQLite rolls back the whole migration, old
`runs` table is untouched, `schema_migrations` never records v35. Next
app start retries cleanly.
## Migration v36 (drop tasks.is_heartbeat + synthetic rows)
Runs now carry `task_id = NULL` for heartbeat dispatches. The
`is_heartbeat` flag is dead data going forward.
1. `UPDATE runs SET task_id = NULL WHERE task_id IN (SELECT id FROM tasks WHERE is_heartbeat = 1)`
2. `DELETE FROM tasks WHERE is_heartbeat = 1` (synthetic rows, not real work)
3. Rebuild `tasks` without the `is_heartbeat` column (same defer-FK +
row-count-assert pattern as v35)
## Code cleanup
- `RunRecord.taskId: string | null`; `createRun` / `cancelRunForDeletion`
/ `finishRun` guard every `UPDATE tasks` path with a null-check.
- `TaskRecord.isHeartbeat` removed; every SELECT / filter / UI reference
dropped.
- Delete `acquireHeartbeatTask` / `findReusableHeartbeatTask` /
`cleanupDuplicateHeartbeatTasks` — dead after the constraint lifts.
- Delete `src/main/orchestration/heartbeat-task.ts` (pure workaround
constant file).
- `heartbeat.ts` creates runs with `taskId: null` when the agent has no
assigned work. Turn context already supports nullable task
(heartbeatFallbackSection); prompt surface unchanged.
- `validateTaskCreation` drops the `isHeartbeat` parameter — user-
authored + automation-authored tasks are never heartbeat.
- Renderer: `run.taskId ? taskMap.get(...) : undefined` in Dashboard /
RunCenter / RunDetail / RunQueue.
- Delete `tests/unit/heartbeat-coalescing.test.ts` (12 tests that
exercised the deleted DB methods).
- Drop 1 isHeartbeat-bypass test from `task-quality-gates.test.ts`.
## Grep verification
- `isHeartbeatTaskTitle src/` → 0
- `acquireHeartbeatTask src/` → migration comment only
- `is_heartbeat src/` → schema.ts migration history only
- `isHeartbeat src/` → 0
Tests: 578/578 (was 591 — delta is 13 tests that tested deleted code).
The earlier sweep cleaned the hot path (worker/runtime/automation/api-
server/ipc core — 59 sites). This pass finishes the deferred long tail:
main/* services, database/* CRUD modules, api-server/* routes, ipc-*
handlers, thread-integration, automation helpers, browser, skills.
Default strategy: catch (error) { logger.warn("[module] context:", ...) }
— preserve current behavior, make the failure visible instead of
silently hidden. Widened 3 logger interface signatures to include warn
where callers only passed info/error previously (thread-helpers,
host-environment-service, ipc-domain-common).
Legitimate boundaries left intact: JSON.parse on untrusted input, DNS
resolver no-records paths, explicit safe* helpers (safeJson, parseJson,
parseTriggerDetail), URL-parse predicates, and `<unserialisable>`
fallbacks inside the prompt-builder summarisers. Each kept catch now
either has a reason in context or is a documented safe* helper.
Tests adjusted only where test-constructed no-op loggers needed a warn
stub (message-dispatch, company-mode-switch, ipc-agent-graph-handlers).
With the earlier pass, AgentCompany no longer has silently-swallowing
catch blocks in main-process or renderer business code.
P2-23: 'lead' in system-prompt.ts matched 'cleaner' / 'leaderboard' via
substring .includes(). Hoist LEADERSHIP_ROLE_KEYWORDS into a shared
agent-role-helpers.ts module; tokenize input on non-alphanum to require
whole-word match.
P3-54: Same keyword list was duplicated in automation-skills with drift
(missing 'ceo', different members). Both sites now call through the
shared helper.
Replace the six inline queryAll calls in routes-agents-standup.ts with
typed domain methods: db.agents gains listDirectReportsForStandup and
listReportStatusesForStandup (LEFT JOIN aggregation), db.tasks gains
listAssigneeTasksForStandup and listTasksForAssignees (safe on empty
assignee list), db.approvals gains listAgentPendingApprovals and
listAgentResolvedApprovals. Shared listRecentTaskComments is reused.
Replace the ad-hoc getApproval helper and the filterable list query
in routes-approvals.ts with db.approvals methods. Add findApprovalById
(non-throwing lookup returning null) and listApprovalsForApi (accepts
requestedByAgentId / relatedTaskId / statuses filters and builds the
prepared statement inside the domain layer).
Replace six inline queryAll calls in routes-work-graph.ts with domain
methods. db.entityCrud gains listGoals, getGoalForUpdate, listProjects,
getProjectForUpdate. db.knowledge gains listSprints. db.company gains
getDashboardSnapshot, which returns the raw agent/task/activity rows
the dashboard handler aggregates. The route-level row shapes are
preserved in the new GoalListRow / ProjectListRow / SprintListRow
types so HTTP responses remain identical.
Replace the inline knowledge_base queryAll in routes-misc.ts with
db.listKnowledgeEntries (added in the previous commit). Routes-misc
now holds no raw SQL.
Replace inline queryAll calls in routes-meetings.ts with two new
domain methods on db.knowledge: listMeetings (powers
GET /api/companies/:companyId/meetings) and getMeeting (used by the
PATCH meeting handler). The MeetingListRow shape mirrors the historical
inline projection so HTTP responses stay byte-stable. Also adds
listKnowledgeEntries here for use by routes-misc.
Replace raw queryAll calls in routes-files.ts with two new domain
methods on db.documents: listDocuments (powers
GET /api/companies/:companyId/documents) and getDocumentForUpdate (used
by the PATCH document handler). The DocumentListRow / DocumentLookupRow
shapes preserve the historical inline-SQL projections so HTTP responses
remain identical.
Replace inline queryAll calls in routes-tasks.ts with two new domain
methods: tasks.listTasksByStatuses (used by GET /api/companies/:id/issues)
and documents.listImportantDocsForReview (used by the deliverable-review
gate). Routes now hold no SQL or column-mapping logic; the
TaskListByStatusesRow shape preserves the existing HTTP response fields
including requiresUserReview as a boolean.
Move the duplicated important-document-type list out of routes-tasks.ts
and routes-files.ts into src/shared/document-categories.ts so the array
and lookup set live in one place.
Replace full-company SELECT * + JS filtering with targeted scoped queries:
- direct reports = agents WHERE reports_to = me
- my tasks = tasks WHERE assignee_agent_id = me
- report tasks = tasks WHERE assignee_agent_id IN (...directReports)
- report status counts = LEFT JOIN tasks GROUP BY report agent
- approvals scoped to requested_by = me with separate pending /
resolved queries (resolved capped at 5 in SQL)
JSON response shape unchanged.
Origin-less requests previously skipped the allowlist entirely, meaning
any process that omitted the Origin header (trivial for a non-browser
attacker) could reach the auth layer. Browsers always send Origin, so
rejecting Origin-less browser-style requests closes the bypass without
breaking agent CLIs, which authenticate with a bearer token instead.
New policy:
- Requests with a Bearer Authorization header: Origin optional; if
present it must be in the allowlist.
- All other requests (including CORS preflight): Origin required and
must be in the allowlist.
ZacharyZhang-NY